GRETNA使用手册

【实例简介】
神经影像学常用处理工具GRETNA使用指南。英文书写。，
GRETNA 6.3. 1. Global Network metrics 38 6.3.2. Nodal and modular network metrics 7. Metric Comparison 7.1. Network and node 71.1.One- Sample t-Test..….….49 7. 1.2. Two-Sample t-Test 50 7.1.3. Paired t-Test,…………,,……,……,…,……,,……,…,……51 7.1.4. One-Way aNcOva.…… 52 7.1.5. One-Way ANcova (Repeated Measures) 7. 1.6. Correlation Analysis... 54 7.2. Connection 55 7.2.1. Averaged( Functiona).…,,…,… 56 7.2.2. Backbone (Structural)..... ...:::::...:::::... 7.2.3. One-Sample t-Test. 7.2.4. Two-Sample t-Test.............. 59 7.3. Results of Metric Comparison .60 7.3.1 Network and node ..60 7.3.2. Connection 62 8. Metric Plotting 8.1 65 8.2.Dot,…,……………………………66 8.3.Vi 67 8.4, Shade,,,,,,,, 68 9. GANNM 9 Acknowledgements 70 Reference.…… 71 Reference Manual for GREtNa ( v2. 0) Page 3 GRETNA 1. Overview Dr. Yong He's Lab, National Key labor Reference Manual for GREtNa ( v2. 0) Page 4 GRETNA 2. License 3. Prerequisites Reference Manual for GREtNa ( v2. 0) Page 5 GRETNA 4. Installation >addpath(genpath(D: \.\GRETNA'))i here“D: GRETNA o Preferences set path Layout 2 arallel EMVIEOSMENT select your GRETNA path, i.e. D:\.\GRETNA 8●5 et Path All changes take effect immediately. MATLAB seard pat Add folder A/home/sandy/sandy.work/GRET NA/FSOm-102 Ac d with suT。|鬥5 y home/sandy/ sandy work / GRETNA/Nletfunctions /home/sandy/ sandy- work/GRET NA/Fipe Script /home/sandy/ sandy- work/GRETNA/ GUI ome/sandy/ sandy- work/ matlab_bgl a/home/sandy/ sandy_work/ matlab_bgl/custom Move to /home/sandy/ sandy- work/matlab_bgl/graphs G,home/sandy/sandy.work/matlabbql/libmbgl MoveUp a/home/sandy/sandy.work/matlab_bgl/libmbgl)Ircl Move Down G/ home/sandy/ sandy work/matlab_bgl/libmbgl/libmbgl-test ome/sandy sandy_ work/ matlab_ _bgl/libmbgl/yas mi Move to botton G/home/sandy/sandy_work/matlab_bgl/libmbgl/yasmic/boost_mod a /home/sandy-work/matlab_bgl/libmbgl/ yasmic/util a/ home/sandy/ sandy_work/ BrainNet'v ewer O/home/sandy/sandy work/ DrainNetV ewer/ Brain Net som8 files a/home/sandy /sandy_work/ RrainNktv ewer/Data torme/andy/sarv wuk/ Brdilely level Ddla Exdrrlefiley Remove Save C Revert Default H Click Reference Manual for GREtNa ( v2. 0) Page 6 GRETNA gretna gretna GRETNAI FC Matrix Construction Network Analysis Metric Comparison Metric Potti GANNM Reference Manual for GREtNa ( v2. 0) Page 7 GRETNA 5. Network Construction 5. 1. R-fMRI Preprocessing o gretna_GUI_Prcprocesslntcrfacc Funct onal datas时t GRETNA Select Path of Functional Data set (e g, FunRaw PreFix(e g, Prefix for Rea igned Data is r R-fMRI Preprocessing Functional Connectivity MatrIx Construction R-MRI Repro Pipeline Option- DICOM to Nill Remove First Normalize Regress out Covariates Temporally Detrend Scrubbing Huncti onal Connectivity Matrix Constructon Static Correlation Dynamical Correlation Current tem Configure Help- Gave Conf guration Load Configuration CType Batch Queues O RUN Reference Manual for GREtNa ( v2. 0) Page 8 GRETNA click the button“ Select path of functional dataset Functional dataset Select Path of Functional Dataset(e. g, FunRaw) Prefix(e. g, Prefix for Realigned Data isr 巴回·x Functional dataset E: Gretna testtest FunRaw Prefix(e.g, Prefix for Realigned Data is r") HC001 IMA (200 Files) Hc002 IMA(200 Files) Hc003 IMA (200 Files Hc004 IMA (200 Files) Reference Manual for GREtNa ( v2. 0) Page g GRETNA Functional dataset J:gretna_testipreprocessing Funlmg PrefIx(e. g, Prefix for Realigned Data Is r No01swdbranNo01. nii NI4D(757 Files)A No02swdbrannooz. nii NI4D【757Fles) No03lswdbrannoo3 nii N4D【757 Files) Noo4swdbrannoo4 ni NAD【757Fils) Copy selected Files to New Folder Configure Save Configuration I oad Configuration CType Batch Queue 3 Quit RUN 5.1.1 DICoM to NIfTI Reference Manual for GREtNa ( v2. 0) Page 10 【实例截图】
【核心代码】